Project Details
TRR 237: Nucleic Acid Immunity
Subject Area
Medicine
Biology
Biology
Term
since 2018
Website
Homepage
Project identifier
Deutsche Forschungsgemeinschaft (DFG) - Project number 369799452
All life forms have developed sophisticated mechanisms to recognize and eliminate foreign genetic material. In recent decades, this research has followed three main directions: nucleic acid (NA) immune sensing receptors, antiviral restriction factors, and NA metabolism. However, current advances have led us to realise that they are all integral parts of a larger NA defence system, which we refer to as Nucleic Acid Immunity. With this consortium, we are taking an integrative and holistic approach to explore the mechanisms and functional consequences of Nucleic Acid Immunity. On the one hand, we focus on gaining fundamental insights into the specific molecular mechanisms that control the defence against pathogen-derived foreign NAs, and on the other hand, we address the functional role of this system in health and disease at the systemic level of the whole organism. Here, special emphasis is placed on the implications of Nucleic Acid Immunity for viral infections, and for sterile inflammatory conditions. Furthermore, rare monogenic diseases caused by dyshomeostasis of Nucleic Acid Immunity offer unprecedented insights into the inner workings of this intricate system.With an interdisciplinary and highly complementary team of scientists, we are in a unique position to answer pressing questions in this field: i) What are the exact non-self features in NAs that are being detected by NA sensors or restriction factors? ii) How do NA-metabolizing systems govern or contribute to self vs. non-self discrimination? iii) How are threshold behaviours of NA sensors and restriction systems realised at the molecular level? iv) How is the subcellular positioning and trafficking of NA sensors regulated and how do their signalling cascades operate? v) How do defects of NA sensing and metabolism trigger systemic autoimmunity and what counter-regulatory mechanisms exist? vi) What determines the immunogenicity of NAs in the context of infection and vaccination and how can these features be leveraged for NA-based therapies? vii) Employing systems approaches, can we identify minimal endotypes in patients suffering from dysregulated NA immune responses, and how can these inform us about the underlying pathophysiology and guide therapy? viii) Having learned much from rare monogenic diseases, can we also identify common genetic variants to understand interindividual heterogeneity in Nucleic Acid Immunity?The results of our work will not only enable fundamental insights into the functioning of the immune system, but also provide important building blocks for the development of new diagnostic and therapeutic concepts for a variety of important diseases including viral infection, sterile inflammatory conditions, and cancer. As a future perspective, we aim at translating these insights into novel molecularly informed clinical applications to achieve accurate diagnosis, patient stratification and targeted therapies thus accelerating the implementation of precision immunology.
DFG Programme
CRC/Transregios
Current projects
- A01 - Systematic dissection of cytosolic DNA sensing and signalling with nanobodies and proteomics (Project Heads Hartmann, Gunther ; Meissner, Felix ; Schmidt, Florian Ingo )
- A02 - Role of self RNA in immune sensing and tolerance (Project Heads Bauer, Stefan ; Zillinger, Thomas )
- A04 - Dissecting immune sensing of viral RNA at the insect-vertebrate barrier to guide improved messenger RNA vaccine design (Project Heads Hartmann, Gunther ; Kümmerer, Beate ; Schlee, Martin )
- A05 - Structural mechanisms of self-nucleic acid sensing by cGAS (Project Head Hopfner, Karl-Peter )
- A06 - Effects of pyroptosis on nucleic acid metabolism and immune sensing (Project Heads Bartok, Eva ; Wolf, Christine )
- A07 - Functions and degradation of endogenously generated viral RNA (Project Head Pichlmair, Andreas )
- A10 - Crosstalk of CARD9/BCL10 and STING Signalling in Nucleic Acid Immunity (Project Head Ruland, Jürgen )
- A11 - Role of UNC93B1 in nucleic acid-sensing TLR function - relevance for the pathogenesis of systemic lupus erythematosus (Project Heads Latz, Eicke ; Lee-Kirsch, Min Ae )
- A23 - Recognition and consequences of RNA G4 structures during stress and infection (Project Head Paeschke, Katrin )
- A25 - Structural mechanism of OAS1 activation by RNA modifications across species (Project Head de Oliveira Mann, Carina )
- A26 - Biomolecular condensates as sensors of nucleic acids (Project Head Alberti, Simon )
- A27 - Chemical biology of intracellular nucleic acid recognition (Project Heads Carell, Thomas ; Hornung, Veit )
- A28 - Cell-fate decision upon RNA sensing by RIG-I like receptors and viral restriction factors (Project Head König, Lars )
- A30 - Higher-order structures of ligand bound RIG-I and cGAS (Project Heads Geyer, Matthias ; Schlee, Martin )
- B14 - Defining predictors of anti-viral immunity in the yellow fever vaccination model using gene polymorphisms and early innate response patterns (Project Heads Krug, Anne ; Rothenfußer, Simon )
- B15 - Sensing of nucleic acids in the pathophysiology of glomerulonephritis associated with chronic viral infection (Project Heads Abdullah, Zeinab ; Kurts, Christian )
- B16 - Sex hormones in STING-mediated nucleic acid recognition (Project Heads Garbi, Natalio ; Teichmann, Lino Lars )
- B17 - Molecular and cellular dynamics of nucleic acid-driven immune responses and immunopathology (Project Head Roers, Axel )
- B18 - Tissue-specific inflammation mechanisms induced by constitutive STING signaling in pediatric autoinflammatory disease with vascular inflammation (Project Heads Rösen-Wolff, Angela ; Teichmann, Lino Lars )
- B19 - Mobile genetic elements as sources of endogenous immune-stimulatory nucleic acids (Project Head Behrendt, Rayk )
- B20 - Intracellular nucleic acid sensing as a trigger of type I interferon-driven autoimmunity affecting the skin (Project Head Günther, Claudia )
- B21 - Phenotypic, genetic, and transcriptional dissection of type I interferonopathies – a systems approach (Project Heads Klughammer, Ph.D., Johanna ; Lee-Kirsch, Min Ae )
- B22 - Potential treatments for autoimmune disorders in a RIG-I mutant mouse model (Project Head Kato, Hiroki )
- B29 - Deciphering genetic regulatory effects of nucleic acid immunity in human dendritic cell populations (Project Head Kim-Hellmuth, Sarah )
- INF - Central Infrastructure of the Collaborative Research Centre (Project Heads Hornung, Veit ; Klughammer, Ph.D., Johanna )
- Z - Central tasks of the Collaborative Research Centre (Project Heads Hartmann, Gunther ; Hornung, Veit )
Completed projects
Applicant Institution
Ludwig-Maximilians-Universität München
Co-Applicant Institution
Rheinische Friedrich-Wilhelms-Universität Bonn; Technische Universität Dresden
Participating University
Philipps-Universität Marburg; Ruprecht-Karls-Universität Heidelberg; Technische Universität München (TUM)
Spokespersons
Professor Dr. Gunther Hartmann, until 12/2022; Professor Dr. Veit Hornung, since 1/2023