Molecular view on binding and unbinding processes between the human β2-adrenergic receptor and its cognate G protein at different stages of the activation cycle

• Applicant: Dr. Kristyna Pluhackova
• Subject Area: Biophysics ; Structural Biology
• Term: from 2017 to 2020
• Project identifier: Deutsche Forschungsgemeinschaft (DFG) - Project number 393547389

The ability of a cell to react to extracellular stimuli is enabled by a complex protein machinery attached to the cell membrane. The core of this machinery consists of transmembrane proteins termed G protein-coupled receptors and their associated G proteins found in the cell interior.This project aims at deciphering the pathways and the underlying free-energy landscapes of the binding and unbinding processes between a G protein and a prominent G-protein coupled receptor, β2-adrenergic receptor, at different stages of the activation cycle and in various membrane environments. The results are expected to provide new important details on the mechanism of signal transmission from the cell exterior to the cell interior and its modulation by membrane composition.Using both atomistic and coarse-grained molecular dynamics simulations we will address the assembly, the structure, and the stability of the signaling complex before and after receptor activation and the stability of the intermediate complex. Simulations will deliver molecular determinants of the G protein-exerted effects on the receptor and an atomistic view on the (un)binding pathways. Moreover, by systematically varying the membrane composition both specific and unspecific effects of different lipids and cholesterol on the interactions between the receptor and the G protein will be elucidated. Complementary multifunctional atomic force microscopy imaging, performed by the host group of Prof. Daniel Müller, will be used to obtain binding force profiles of the G protein to the receptor along the dissociation/association pathways. Moreover, dynamic single-molecule force spectroscopy will be applied to study (de)stabilization effects of the G protein on the receptor at different stages of the activation cycle.This collaborative effort - combining molecular dynamics simulations and atomic force miscroscopy - aims to provide first information at atomistic resolution on the assembly and disassembly of the G protein-coupled receptor/G protein signaling complex and lipid modulation effects thereon.

• DFG Programme: Research Fellowships
• International Connection: Switzerland
• Host: Professor Dr. Daniel J. Müller